Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upf3bQ3ULL6 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm12308-201ENSMUST00000120440 389 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm6446-201ENSMUST00000120604 818 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm15300-201ENSMUST00000122324 279 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm15187-201ENSMUST00000122329 264 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm14349-201ENSMUST00000137155 902 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm20620-201ENSMUST00000177528 168 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm17048-201ENSMUST00000179266 847 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm9685-201ENSMUST00000211275 538 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm24041-201ENSMUST00000083115 156 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Upf3bQ3ULL6 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm13998-201ENSMUST00000120952 335 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm8317-201ENSMUST00000121261 471 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm12396-201ENSMUST00000121600 306 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm26346-201ENSMUST00000157525 329 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm23903-201ENSMUST00000157566 131 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm25387-201ENSMUST00000157813 132 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm20778-201ENSMUST00000178524 627 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm21542-201ENSMUST00000182307 993 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm8183-201ENSMUST00000183134 980 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm3351-201ENSMUST00000193454 505 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm37463-201ENSMUST00000193819 796 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm6070-201ENSMUST00000207275 419 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm10688-201ENSMUST00000214985 520 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms