Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28064-201ENSMUST00000185639 858 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm8009-201ENSMUST00000191672 436 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm37809-201ENSMUST00000195050 931 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm18805-201ENSMUST00000206872 655 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm11799-201ENSMUST00000116110 460 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm7058-201ENSMUST00000119209 902 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm15840-201ENSMUST00000122099 943 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm3242-201ENSMUST00000171273 485 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm37901-201ENSMUST00000195107 514 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm43390-201ENSMUST00000196614 421 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm7554-201ENSMUST00000202282 574 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm43929-201ENSMUST00000203025 409 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm2926-201ENSMUST00000205625 239 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm4083-201ENSMUST00000207158 451 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm19154-201ENSMUST00000223330 940 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trafd1Q3UDK1 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm14018-201ENSMUST00000119042 455 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm11990-201ENSMUST00000121505 897 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm25342-201ENSMUST00000157459 122 ntBASIC6.05□□□□□ -1.44
Trafd1Q3UDK1 Gm24435-201ENSMUST00000157886 110 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms