Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm38181-201ENSMUST00000181357 720 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.92□□□□□ -1.3
Sox9Q04887 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm28080-201ENSMUST00000188552 722 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.92□□□□□ -1.3
Sox9Q04887 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Sox9Q04887 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm9432-201ENSMUST00000117810 759 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
Sox9Q04887 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm17217-201ENSMUST00000166613 469 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.91□□□□□ -1.3
Sox9Q04887 Mir3572-201ENSMUST00000175549 86 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm26570-201ENSMUST00000180672 342 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 V1rg10-201ENSMUST00000183378 937 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm28803-201ENSMUST00000190385 764 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm5309-201ENSMUST00000197416 677 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 BC049739-201ENSMUST00000202626 660 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm4374-201ENSMUST00000204929 424 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm31166-201ENSMUST00000209326 288 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gm8256-203ENSMUST00000228692 591 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox9Q04887 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.91□□□□□ -1.3
Sox9Q04887 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox9Q04887 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Sox9Q04887 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms