Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm17973-201ENSMUST00000174509 520 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm27401-201ENSMUST00000184052 173 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm21728-201ENSMUST00000188442 695 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm21889-201ENSMUST00000188487 695 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm20932-201ENSMUST00000189115 694 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm21920-201ENSMUST00000190042 695 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm6077-201ENSMUST00000196008 499 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm43922-201ENSMUST00000205071 328 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC6.62□□□□□ -1.35
Msx2Q03358 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.62□□□□□ -1.35
Msx2Q03358 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.62□□□□□ -1.35
Msx2Q03358 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Msx2Q03358 Mir465-201ENSMUST00000093563 74 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Msx2Q03358 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Msx2Q03358 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Msx2Q03358 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.62□□□□□ -1.35
Msx2Q03358 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Msx2Q03358 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Msx2Q03358 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Msx2Q03358 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm11972-201ENSMUST00000118514 389 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Msx2Q03358 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
Msx2Q03358 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm23220-201ENSMUST00000158115 137 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm7991-201ENSMUST00000168668 591 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm20637-201ENSMUST00000175715 462 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm27659-201ENSMUST00000183472 98 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Mir6415-201ENSMUST00000184064 100 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm29168-201ENSMUST00000189953 687 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm38079-201ENSMUST00000195603 154 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm5995-201ENSMUST00000204107 1273 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm45343-201ENSMUST00000210452 828 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Msx2Q03358 Gm45712-201ENSMUST00000212417 335 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 AC153541.1-201ENSMUST00000213786 294 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Msx2Q03358 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC6.61□□□□□ -1.35
Msx2Q03358 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.61□□□□□ -1.35
Msx2Q03358 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms