Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cux1P53564 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cux1P53564 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cux1P53564 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cux1P53564 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC9.3□□□□□ -0.92
Cux1P53564 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cux1P53564 Gm15335-201ENSMUST00000122442 411 ntBASIC9.3□□□□□ -0.92
Cux1P53564 Gm23799-201ENSMUST00000175559 120 ntBASIC9.3□□□□□ -0.92
Cux1P53564 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Cux1P53564 Gm8321-201ENSMUST00000181691 980 ntBASIC9.3□□□□□ -0.92
Cux1P53564 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cux1P53564 Gm43516-201ENSMUST00000196891 322 ntBASIC9.3□□□□□ -0.92
Cux1P53564 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cux1P53564 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cux1P53564 Gm45493-201ENSMUST00000209494 3948 ntBASIC9.3□□□□□ -0.92
Cux1P53564 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Cux1P53564 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 Gm7337-202ENSMUST00000181439 2655 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Gm37738-201ENSMUST00000192396 4716 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 CT025535.2-201ENSMUST00000228572 7441 ntBASIC9.29□□□□□ -0.92
Cux1P53564 AC122357.3-201ENSMUST00000221260 2293 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Gm38451-201ENSMUST00000208329 2646 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Gm43745-201ENSMUST00000198085 1883 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Cux1P53564 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Gm12293-201ENSMUST00000121898 590 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC9.29□□□□□ -0.92
Cux1P53564 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Gm31211-201ENSMUST00000199170 253 ntBASIC9.29□□□□□ -0.92
Cux1P53564 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 Gm5229-201ENSMUST00000039375 354 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Cux1P53564 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Cux1P53564 Gm37897-201ENSMUST00000192613 3561 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC9.29□□□□□ -0.92
Cux1P53564 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Cux1P53564 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Cux1P53564 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Cux1P53564 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cux1P53564 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Gm37347-201ENSMUST00000193969 3071 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC9.28□□□□□ -0.92
Cux1P53564 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Gm12488-201ENSMUST00000122449 499 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Gm28061-201ENSMUST00000189085 807 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Gm28507-201ENSMUST00000189737 703 ntBASIC9.28□□□□□ -0.92
Cux1P53564 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC9.28□□□□□ -0.92
Cux1P53564 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Gm20786-201ENSMUST00000212649 436 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Mir337-201ENSMUST00000083592 97 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Gm17165-201ENSMUST00000096155 493 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Gm38120-201ENSMUST00000195506 4642 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cux1P53564 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC9.28□□□□□ -0.92
Cux1P53564 Gm42989-201ENSMUST00000200646 2306 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Gm15425-201ENSMUST00000119013 2711 ntBASIC9.28□□□□□ -0.92
Cux1P53564 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cux1P53564 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 Gm13887-201ENSMUST00000119009 344 ntBASIC9.27□□□□□ -0.93
Cux1P53564 Gm14871-201ENSMUST00000119056 194 ntBASIC9.27□□□□□ -0.93
Cux1P53564 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC9.27□□□□□ -0.93
Cux1P53564 Gm23250-201ENSMUST00000157444 267 ntBASIC9.27□□□□□ -0.93
Cux1P53564 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 Mir3080-201ENSMUST00000175010 79 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms