Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm29509-201ENSMUST00000185716 321 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm7492-201ENSMUST00000201745 725 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 AC159819.1-201ENSMUST00000213911 328 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm46436-201ENSMUST00000221851 1294 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm40598-201ENSMUST00000222953 547 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Shmt1P50431 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Shmt1P50431 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm23102-201ENSMUST00000083724 116 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Shmt1P50431 AU020206-202ENSMUST00000206358 3009 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Shmt1P50431 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm23311-201ENSMUST00000104152 134 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm12307-201ENSMUST00000120581 590 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm14054-201ENSMUST00000120744 704 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.76□□□□□ -1.33
Shmt1P50431 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm22817-201ENSMUST00000157448 356 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm25374-201ENSMUST00000158158 101 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shmt1P50431 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shmt1P50431 Mir6374-201ENSMUST00000184003 107 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm8869-201ENSMUST00000195222 947 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm43354-201ENSMUST00000196862 346 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm43104-201ENSMUST00000197234 311 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm17824-201ENSMUST00000197690 805 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm4410-201ENSMUST00000199349 686 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Gm4928-201ENSMUST00000219622 850 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 AC154245.1-201ENSMUST00000224615 601 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shmt1P50431 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Shmt1P50431 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Shmt1P50431 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Shmt1P50431 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.76□□□□□ -1.33
Shmt1P50431 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Shmt1P50431 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Shmt1P50431 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms