Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.87□□□□□ -1.31
Brca1P48754 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Brca1P48754 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Brca1P48754 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.87□□□□□ -1.31
Brca1P48754 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.87□□□□□ -1.31
Brca1P48754 Mir7031-201ENSMUST00000183860 65 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Gm5334-201ENSMUST00000187472 720 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Gm43744-201ENSMUST00000196387 688 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.87□□□□□ -1.31
Brca1P48754 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.87□□□□□ -1.31
Brca1P48754 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.87□□□□□ -1.31
Brca1P48754 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.87□□□□□ -1.31
Brca1P48754 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC6.87□□□□□ -1.31
Brca1P48754 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.87□□□□□ -1.31
Brca1P48754 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brca1P48754 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Brca1P48754 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Brca1P48754 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Brca1P48754 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
Brca1P48754 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Gm25758-201ENSMUST00000103987 129 ntBASIC6.86□□□□□ -1.31
Brca1P48754 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.86□□□□□ -1.31
Brca1P48754 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Gm42522-201ENSMUST00000196071 255 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Gm6520-201ENSMUST00000200636 410 ntBASIC6.86□□□□□ -1.31
Brca1P48754 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.86□□□□□ -1.31
Brca1P48754 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Gm5087-204ENSMUST00000225820 645 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Brca1P48754 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Brca1P48754 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brca1P48754 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.86□□□□□ -1.31
Brca1P48754 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.86□□□□□ -1.31
Brca1P48754 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brca1P48754 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm15120-201ENSMUST00000120602 301 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gm15335-201ENSMUST00000122442 411 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.85□□□□□ -1.31
Brca1P48754 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.85□□□□□ -1.31
Brca1P48754 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms