Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx2P43241 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Cdx2P43241 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Cdx2P43241 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Cdx2P43241 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm25906-201ENSMUST00000158489 126 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdx2P43241 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm24303-201ENSMUST00000178237 126 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm29159-201ENSMUST00000187969 379 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm19231-201ENSMUST00000193212 830 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm37235-201ENSMUST00000195171 59 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdx2P43241 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm19060-201ENSMUST00000201959 421 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdx2P43241 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.87□□□□□ -1.47
Cdx2P43241 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx2P43241 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
Cdx2P43241 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx2P43241 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Cdx2P43241 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.86□□□□□ -1.47
Cdx2P43241 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx2P43241 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdx2P43241 Mir449c-201ENSMUST00000102192 109 ntBASIC5.86□□□□□ -1.47
Cdx2P43241 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms