Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Gm22020-201ENSMUST00000104358 136 ntBASIC6.2□□□□□ -1.42
HttP42859 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Gm43744-201ENSMUST00000196387 688 ntBASIC6.2□□□□□ -1.42
HttP42859 Gm43408-201ENSMUST00000198263 440 ntBASIC6.2□□□□□ -1.42
HttP42859 Gm42646-201ENSMUST00000202233 914 ntBASIC6.2□□□□□ -1.42
HttP42859 Gm22350-201ENSMUST00000083924 156 ntBASIC6.2□□□□□ -1.42
HttP42859 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.2□□□□□ -1.42
HttP42859 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.2□□□□□ -1.42
HttP42859 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Gm13733-201ENSMUST00000117290 535 ntBASIC6.2□□□□□ -1.42
HttP42859 Gm12328-201ENSMUST00000118611 197 ntBASIC6.2□□□□□ -1.42
HttP42859 Gm25292-201ENSMUST00000122797 322 ntBASIC6.2□□□□□ -1.42
HttP42859 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.2□□□□□ -1.42
HttP42859 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.2□□□□□ -1.42
HttP42859 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.2□□□□□ -1.42
HttP42859 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.2□□□□□ -1.42
HttP42859 Gm29332-201ENSMUST00000190829 227 ntBASIC6.2□□□□□ -1.42
HttP42859 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Gm22053-201ENSMUST00000083394 200 ntBASIC6.2□□□□□ -1.42
HttP42859 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 AC122881.1-201ENSMUST00000225757 2695 ntBASIC6.2□□□□□ -1.42
HttP42859 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.2□□□□□ -1.42
HttP42859 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.19□□□□□ -1.42
HttP42859 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.19□□□□□ -1.42
HttP42859 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HttP42859 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Gm14349-201ENSMUST00000137155 902 ntBASIC6.19□□□□□ -1.42
HttP42859 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm18150-201ENSMUST00000195341 645 ntBASIC6.19□□□□□ -1.42
HttP42859 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC6.19□□□□□ -1.42
HttP42859 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm44776-201ENSMUST00000207212 381 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm21041-201ENSMUST00000214829 823 ntBASIC6.19□□□□□ -1.42
HttP42859 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.19□□□□□ -1.42
HttP42859 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
HttP42859 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Gm232-201ENSMUST00000216549 2559 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm24429-201ENSMUST00000104076 132 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm19898-201ENSMUST00000177490 251 ntBASIC6.19□□□□□ -1.42
HttP42859 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm23626-201ENSMUST00000082458 133 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.19□□□□□ -1.42
HttP42859 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.19□□□□□ -1.42
HttP42859 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.19□□□□□ -1.42
HttP42859 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Gm4854-201ENSMUST00000185902 574 ntBASIC6.19□□□□□ -1.42
HttP42859 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HttP42859 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HttP42859 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HttP42859 Gm15168-201ENSMUST00000121057 316 ntBASIC6.18□□□□□ -1.42
HttP42859 Gm37511-201ENSMUST00000192901 294 ntBASIC6.18□□□□□ -1.42
HttP42859 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.18□□□□□ -1.42
HttP42859 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.18□□□□□ -1.42
HttP42859 Gm43919-201ENSMUST00000204303 364 ntBASIC6.18□□□□□ -1.42
HttP42859 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.18□□□□□ -1.42
HttP42859 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
HttP42859 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Gm23795-201ENSMUST00000084006 137 ntBASIC6.18□□□□□ -1.42
HttP42859 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.18□□□□□ -1.42
HttP42859 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HttP42859 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms