Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chd1P40201 AC162936.1-201ENSMUST00000223676 2368 ntBASIC9.09□□□□□ -0.95
Chd1P40201 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chd1P40201 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chd1P40201 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chd1P40201 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.09□□□□□ -0.95
Chd1P40201 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Chd1P40201 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Chd1P40201 Abcc2-202ENSMUST00000099413 1926 ntBASIC9.09□□□□□ -0.95
Chd1P40201 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Chd1P40201 AC158537.1-201ENSMUST00000224637 1711 ntBASIC9.09□□□□□ -0.96
Chd1P40201 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Gm13681-201ENSMUST00000117925 210 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm15171-201ENSMUST00000122191 334 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm9006-201ENSMUST00000165520 841 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm25534-201ENSMUST00000175365 125 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm17984-201ENSMUST00000205286 859 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm3257-201ENSMUST00000207217 675 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Gm20786-201ENSMUST00000212649 436 ntBASIC9.08□□□□□ -0.96
Chd1P40201 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC9.08□□□□□ -0.96
Chd1P40201 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Chd1P40201 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Chd1P40201 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Gm12115-201ENSMUST00000119969 447 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm22342-201ENSMUST00000122647 298 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm26950-201ENSMUST00000182734 498 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Mir6337-201ENSMUST00000184194 105 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 Gm2429-201ENSMUST00000194635 586 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 Gm7333-201ENSMUST00000213449 1060 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm18628-201ENSMUST00000220584 475 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC9.08□□□□□ -0.96
Chd1P40201 AC211878.1-201ENSMUST00000221668 474 ntBASIC9.08□□□□□ -0.96
Chd1P40201 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Chd1P40201 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.07□□□□□ -0.96
Chd1P40201 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 CT025686.2-201ENSMUST00000227898 3315 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Gm11774-201ENSMUST00000118601 293 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Gm11805-201ENSMUST00000121238 600 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Gm25605-201ENSMUST00000158364 124 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Gm17907-201ENSMUST00000173150 710 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Gm25942-201ENSMUST00000180080 110 ntBASIC9.07□□□□□ -0.96
Chd1P40201 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Chd1P40201 Gm35648-201ENSMUST00000202304 475 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 AC129085.4-201ENSMUST00000224536 570 ntBASIC9.07□□□□□ -0.96
Chd1P40201 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chd1P40201 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chd1P40201 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chd1P40201 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chd1P40201 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Chd1P40201 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Chd1P40201 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Gm43483-201ENSMUST00000196724 2860 ntBASIC9.06□□□□□ -0.96
Chd1P40201 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC9.06□□□□□ -0.96
Chd1P40201 Gm37474-201ENSMUST00000194812 1814 ntBASIC9.06□□□□□ -0.96
Chd1P40201 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Gm25389-201ENSMUST00000157340 286 ntBASIC9.06□□□□□ -0.96
Chd1P40201 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Gm42720-201ENSMUST00000196813 300 ntBASIC9.06□□□□□ -0.96
Chd1P40201 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms