Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC8.23□□□□□ -1.09
Col18a1P39061 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Col18a1P39061 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm12074-201ENSMUST00000120189 219 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC8.22□□□□□ -1.09
Col18a1P39061 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm23774-201ENSMUST00000158990 131 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm25037-201ENSMUST00000175418 110 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm24111-201ENSMUST00000175491 97 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm28665-201ENSMUST00000189269 670 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm2053-201ENSMUST00000195671 631 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm18871-201ENSMUST00000218655 745 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 AC124408.2-201ENSMUST00000228168 645 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col18a1P39061 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Col18a1P39061 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col18a1P39061 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC8.22□□□□□ -1.09
Col18a1P39061 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm13488-201ENSMUST00000120419 179 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm15044-201ENSMUST00000120703 598 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm14908-201ENSMUST00000120930 1286 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC8.22□□□□□ -1.09
Col18a1P39061 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm22277-201ENSMUST00000157204 277 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm26106-201ENSMUST00000157254 228 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm26357-201ENSMUST00000158218 115 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Mir6926-201ENSMUST00000184562 68 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm17981-201ENSMUST00000191109 739 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm21461-201ENSMUST00000200382 863 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 AC120394.1-201ENSMUST00000217153 351 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Gm18242-201ENSMUST00000218455 542 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col18a1P39061 Mir342-201ENSMUST00000083502 99 ntBASIC8.22□□□□□ -1.09
Col18a1P39061 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col18a1P39061 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col18a1P39061 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col18a1P39061 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.21□□□□□ -1.09
Col18a1P39061 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col18a1P39061 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col18a1P39061 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Gm6027-201ENSMUST00000121467 756 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Gm6067-201ENSMUST00000121648 491 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Gm8185-201ENSMUST00000160999 669 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC8.21□□□□□ -1.1
Col18a1P39061 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC8.21□□□□□ -1.1
Col18a1P39061 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col18a1P39061 Gm29376-201ENSMUST00000189357 835 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC8.21□□□□□ -1.1
Col18a1P39061 Gm44332-201ENSMUST00000203712 433 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Gm44837-201ENSMUST00000206863 717 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col18a1P39061 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col18a1P39061 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms