Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm26289-201ENSMUST00000104169 131 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm25346-201ENSMUST00000104509 128 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm11462-201ENSMUST00000117749 562 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm18700-201ENSMUST00000185791 553 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm37177-201ENSMUST00000193768 417 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm7626-201ENSMUST00000195801 353 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm19080-201ENSMUST00000196082 550 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm43762-201ENSMUST00000201521 295 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Gm5418-201ENSMUST00000206932 528 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Mmp13P33435 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.23□□□□□ -1.41
Mmp13P33435 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Mmp13P33435 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Mmp13P33435 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Mmp13P33435 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm14375-201ENSMUST00000119490 855 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm11617-201ENSMUST00000119609 639 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm12140-201ENSMUST00000121214 544 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm12399-201ENSMUST00000121475 446 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm11341-201ENSMUST00000122316 447 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm23903-201ENSMUST00000157566 131 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Mir6362-201ENSMUST00000184329 107 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm27348-201ENSMUST00000184511 170 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm5694-201ENSMUST00000195648 641 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm43390-201ENSMUST00000196614 421 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.22□□□□□ -1.41
Mmp13P33435 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.22□□□□□ -1.41
Mmp13P33435 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Mmp13P33435 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Mmp13P33435 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms