Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm8009-201ENSMUST00000191672 436 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm18789-201ENSMUST00000216115 550 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Mir296-201ENSMUST00000083587 79 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm22256-201ENSMUST00000102291 107 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx1P18111 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm13878-201ENSMUST00000117986 577 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm11501-201ENSMUST00000118039 581 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm2199-201ENSMUST00000119065 874 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm5166-201ENSMUST00000121332 573 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm8722-201ENSMUST00000121466 769 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx1P18111 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm37669-201ENSMUST00000192184 820 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm37620-201ENSMUST00000192910 501 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm44374-201ENSMUST00000199821 140 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm43377-201ENSMUST00000201640 455 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm44111-201ENSMUST00000204649 399 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm44705-201ENSMUST00000206719 339 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 AC123917.1-201ENSMUST00000228063 1048 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Cdx1P18111 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx1P18111 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx1P18111 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx1P18111 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Cdx1P18111 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Cdx1P18111 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Cdx1P18111 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdx1P18111 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.07□□□□□ -1.6
Cdx1P18111 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx1P18111 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx1P18111 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx1P18111 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms