Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm3307-201ENSMUST00000176164 632 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col1a1P11087 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm44494-201ENSMUST00000196760 129 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Gm44219-201ENSMUST00000203005 273 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col1a1P11087 AV026068-231ENSMUST00000225862 482 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 n-R5s180-201ENSMUST00000082770 106 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col1a1P11087 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm7155-201ENSMUST00000121143 1671 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Col1a1P11087 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Col1a1P11087 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Col1a1P11087 Gm44102-201ENSMUST00000204031 1666 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.13□□□□□ -1.27
Col1a1P11087 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Col1a1P11087 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm14349-201ENSMUST00000137155 902 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm26106-201ENSMUST00000157254 228 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm26172-201ENSMUST00000158421 134 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm18343-201ENSMUST00000172802 604 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col1a1P11087 Gm27039-201ENSMUST00000182438 962 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm37070-201ENSMUST00000193272 460 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm44184-201ENSMUST00000204290 132 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col1a1P11087 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC7.13□□□□□ -1.27
Col1a1P11087 Gm6474-201ENSMUST00000223250 699 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 AC124408.2-201ENSMUST00000228168 645 ntBASIC7.13□□□□□ -1.27
Col1a1P11087 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col1a1P11087 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.13□□□□□ -1.27
Col1a1P11087 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col1a1P11087 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Col1a1P11087 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col1a1P11087 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col1a1P11087 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Mir1188-201ENSMUST00000116756 120 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm11972-201ENSMUST00000118514 389 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm5387-201ENSMUST00000119776 857 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm11197-201ENSMUST00000145158 839 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm22895-201ENSMUST00000157508 308 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm23553-201ENSMUST00000157817 295 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm15970-201ENSMUST00000160623 834 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm43516-201ENSMUST00000196891 322 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm38670-201ENSMUST00000199248 77 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Gm3785-201ENSMUST00000221000 202 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col1a1P11087 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm36936-201ENSMUST00000194508 2749 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.12□□□□□ -1.27
Col1a1P11087 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
Col1a1P11087 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col1a1P11087 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col1a1P11087 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 1093.7 ms