Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm6446-201ENSMUST00000120604 818 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm11925-201ENSMUST00000121375 535 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm15618-201ENSMUST00000121610 452 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm24359-201ENSMUST00000158418 221 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm23386-201ENSMUST00000158585 144 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Mir7082-201ENSMUST00000183526 92 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm21461-201ENSMUST00000200382 863 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm18628-201ENSMUST00000220584 475 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm22684-201ENSMUST00000082849 132 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Chmp6P0C0A3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm4914-201ENSMUST00000119757 459 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm12115-201ENSMUST00000119969 447 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm11879-201ENSMUST00000121885 702 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm22276-201ENSMUST00000122469 129 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm20620-201ENSMUST00000177528 168 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm27005-201ENSMUST00000182783 921 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm29111-201ENSMUST00000188823 696 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm28584-201ENSMUST00000191489 696 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm37784-201ENSMUST00000193233 189 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm38138-201ENSMUST00000193274 696 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm37991-201ENSMUST00000194297 696 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm2602-201ENSMUST00000202112 571 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm5306-201ENSMUST00000203325 757 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms