Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxa3P02831 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.56□□□□□ -1.52
Hoxa3P02831 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxa3P02831 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxa3P02831 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxa3P02831 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Hoxa3P02831 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxa3P02831 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxa3P02831 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxa3P02831 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxa3P02831 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm42736-201ENSMUST00000200723 1353 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm7869-201ENSMUST00000121457 1322 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm4992-201ENSMUST00000120256 768 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm13118-201ENSMUST00000120402 549 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Mup-ps13-201ENSMUST00000120662 545 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm12748-201ENSMUST00000120763 504 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm12313-201ENSMUST00000121347 421 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm13024-201ENSMUST00000121756 718 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxa3P02831 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm23276-201ENSMUST00000157913 138 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm23891-201ENSMUST00000158114 138 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm21909-201ENSMUST00000178260 439 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm27295-201ENSMUST00000184264 153 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm28688-201ENSMUST00000187301 268 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm45626-201ENSMUST00000210093 361 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm5119-201ENSMUST00000215858 634 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxa3P02831 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm25587-201ENSMUST00000082498 166 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm23448-201ENSMUST00000083151 104 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.55□□□□□ -1.52
Hoxa3P02831 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxa3P02831 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Hoxa3P02831 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hoxa3P02831 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxa3P02831 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms