Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Upk3aQ9JKX8 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm24434-201ENSMUST00000104081 132 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm23757-201ENSMUST00000158353 100 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm20480-201ENSMUST00000173953 250 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm26923-201ENSMUST00000182615 996 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm18407-201ENSMUST00000192126 790 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm45246-201ENSMUST00000210820 367 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Upk3aQ9JKX8 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm8501-201ENSMUST00000117684 432 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm14580-201ENSMUST00000119122 718 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm8317-201ENSMUST00000121261 471 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm15300-201ENSMUST00000122324 279 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Snora47-201ENSMUST00000157483 138 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Mir6992-201ENSMUST00000183342 109 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm28527-201ENSMUST00000185210 297 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm29519-201ENSMUST00000186994 398 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm29072-201ENSMUST00000191149 678 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm3351-201ENSMUST00000193454 505 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm44382-201ENSMUST00000198683 122 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm44251-201ENSMUST00000204963 442 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm8290-201ENSMUST00000218202 477 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm24200-201ENSMUST00000082955 157 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm6990-201ENSMUST00000086830 348 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms