Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm14797-201ENSMUST00000119378 1480 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm13265-201ENSMUST00000118090 421 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm13455-201ENSMUST00000118767 517 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm12565-201ENSMUST00000119004 649 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm23429-201ENSMUST00000122486 149 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm23740-201ENSMUST00000157385 100 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm26355-201ENSMUST00000158220 105 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm7952-201ENSMUST00000180540 984 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm26738-201ENSMUST00000181312 601 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm27849-201ENSMUST00000183673 125 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 BC049739-201ENSMUST00000202626 660 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm44312-201ENSMUST00000203536 469 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm43945-201ENSMUST00000203595 754 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm18838-201ENSMUST00000204855 886 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm17850-201ENSMUST00000210023 1154 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm45608-201ENSMUST00000210948 389 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm18160-201ENSMUST00000214279 827 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.28□□□□□ -1.08
RtcbQ99LF4 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.27□□□□□ -1.08
RtcbQ99LF4 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
RtcbQ99LF4 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.27□□□□□ -1.08
RtcbQ99LF4 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm26289-201ENSMUST00000104169 131 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm7206-201ENSMUST00000117730 508 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm11891-201ENSMUST00000121241 619 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm5401-201ENSMUST00000122444 365 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm24719-201ENSMUST00000157520 110 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm24962-201ENSMUST00000157917 109 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm23030-201ENSMUST00000158004 273 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm24733-201ENSMUST00000158863 253 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RtcbQ99LF4 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm5853-201ENSMUST00000197183 632 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm9535-201ENSMUST00000218499 768 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 AC119894.1-201ENSMUST00000220399 350 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 Gm32300-201ENSMUST00000221735 515 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 AL669819.1-201ENSMUST00000225143 330 ntBASIC8.27□□□□□ -1.09
RtcbQ99LF4 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RtcbQ99LF4 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms