Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm11256-201ENSMUST00000118109 829 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm13702-201ENSMUST00000118542 825 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm18808-201ENSMUST00000173316 462 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm13147-202ENSMUST00000177526 1173 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm38237-201ENSMUST00000193366 376 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm6009-201ENSMUST00000210848 280 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm24032-201ENSMUST00000083932 159 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim9Q8C7M3 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm8722-201ENSMUST00000121466 769 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm24812-201ENSMUST00000175315 284 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm27468-201ENSMUST00000183577 106 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim9Q8C7M3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms