Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm44248-201ENSMUST00000203079 1549 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Asgr2-201ENSMUST00000102572 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Ces2g-201ENSMUST00000043183 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Spn-201ENSMUST00000049931 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 A430046D13Rik-201ENSMUST00000180477 1997 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm42494-201ENSMUST00000196515 3051 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Tdpoz1-202ENSMUST00000181541 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Tmem175-203ENSMUST00000120327 1811 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 CT009480.2-201ENSMUST00000225152 3369 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Txndc16-201ENSMUST00000022377 4028 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 CT025556.1-201ENSMUST00000222965 1884 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 AC127597.2-201ENSMUST00000223947 2209 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Lrp1b-207ENSMUST00000142688 2911 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm37314-201ENSMUST00000193545 2685 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Igkv4-86-201ENSMUST00000103337 340 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm14050-201ENSMUST00000117052 346 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm12452-201ENSMUST00000117128 331 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm14891-201ENSMUST00000117378 596 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm15382-201ENSMUST00000118011 537 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm5759-201ENSMUST00000119203 811 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm12493-201ENSMUST00000150111 441 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm6822-201ENSMUST00000161440 307 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm4868-201ENSMUST00000164138 789 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Spin2g-201ENSMUST00000178425 687 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm17965-201ENSMUST00000193904 517 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm35067-201ENSMUST00000194355 647 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm42883-201ENSMUST00000202594 222 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm44611-201ENSMUST00000207507 355 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm35262-201ENSMUST00000215133 267 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 AC120375.2-202ENSMUST00000228722 397 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Olfr545-201ENSMUST00000058750 951 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm22358-201ENSMUST00000082877 122 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Mir181c-201ENSMUST00000083549 89 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm25188-201ENSMUST00000083913 122 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Mir471-201ENSMUST00000093596 67 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Gm10824-201ENSMUST00000220000 2198 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Hacl1-201ENSMUST00000022437 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 C78859-201ENSMUST00000212800 5943 ntBASIC9.07□□□□□ -0.96
Trim35Q8C006 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim35Q8C006 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Msl3-201ENSMUST00000033725 2399 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Dhcr7-201ENSMUST00000073878 2815 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC9.07□□□□□ -0.96
Trim35Q8C006 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Nup98-204ENSMUST00000211005 3961 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 AC118222.1-201ENSMUST00000222184 2973 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 122.7 ms