Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC9.52□□□□□ -0.89
Col17a1Q07563 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 AC124445.1-201ENSMUST00000218613 452 ntBASIC9.52□□□□□ -0.89
Col17a1Q07563 AC139758.1-201ENSMUST00000226573 930 ntBASIC9.52□□□□□ -0.89
Col17a1Q07563 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm12919-201ENSMUST00000119855 1594 ntBASIC9.52□□□□□ -0.89
Col17a1Q07563 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 CT009757.6-201ENSMUST00000220661 2312 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms