Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.94□□□□□ -1.3
Sox9Q04887 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.93□□□□□ -1.3
Sox9Q04887 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm26422-201ENSMUST00000104276 132 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm12768-201ENSMUST00000120055 759 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm14202-201ENSMUST00000120121 311 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm15795-201ENSMUST00000160969 553 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm2966-201ENSMUST00000166052 481 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm17204-201ENSMUST00000167936 478 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm18199-201ENSMUST00000173820 835 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm20397-201ENSMUST00000174520 362 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm43354-201ENSMUST00000196862 346 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm44471-201ENSMUST00000197963 100 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox9Q04887 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox9Q04887 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox9Q04887 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.92□□□□□ -1.3
Sox9Q04887 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Sox9Q04887 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 Mir669o-201ENSMUST00000103898 96 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm23440-201ENSMUST00000104299 130 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Mir466f-2-201ENSMUST00000104805 94 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm13428-201ENSMUST00000117540 365 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm14388-201ENSMUST00000118119 477 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm15780-201ENSMUST00000121283 935 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm22361-201ENSMUST00000158435 176 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Scarna6-201ENSMUST00000158656 265 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm17061-201ENSMUST00000163167 499 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.92□□□□□ -1.3
Sox9Q04887 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox9Q04887 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Sox9Q04887 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Sox9Q04887 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 637 ms