Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 AC129208.2-201ENSMUST00000228506 320 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm24871-201ENSMUST00000083099 116 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm25099-201ENSMUST00000093716 116 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Rnu5g-201ENSMUST00000093721 116 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Grik1-209ENSMUST00000227986 2942 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 CT010505.3-201ENSMUST00000227835 1651 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm5841-201ENSMUST00000195307 2177 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 AC164437.5-201ENSMUST00000227235 4414 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm12994-201ENSMUST00000119601 447 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm11198-201ENSMUST00000119771 974 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm15181-201ENSMUST00000120142 177 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm12307-201ENSMUST00000120581 590 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm15300-201ENSMUST00000122324 279 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm25780-201ENSMUST00000122528 253 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm24395-201ENSMUST00000158139 125 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm23633-201ENSMUST00000175293 119 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm19560-201ENSMUST00000177510 514 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm28637-201ENSMUST00000179424 345 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm26933-201ENSMUST00000182320 827 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm27348-201ENSMUST00000184511 170 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm17895-201ENSMUST00000194028 874 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm42625-201ENSMUST00000198611 922 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm43459-201ENSMUST00000202093 331 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm43501-201ENSMUST00000202513 107 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm7499-201ENSMUST00000210423 813 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
Col8a1Q00780 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm18305-201ENSMUST00000216532 2128 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm9110-201ENSMUST00000219035 617 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.97□□□□□ -1.45
Col8a1Q00780 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm10221-201ENSMUST00000088299 309 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col8a1Q00780 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col8a1Q00780 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.97□□□□□ -1.45
Col8a1Q00780 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms