Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm25345-201ENSMUST00000104505 133 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm16269-201ENSMUST00000160532 409 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm37265-201ENSMUST00000191698 885 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm37609-201ENSMUST00000191778 678 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Mir6906-201ENSMUST00000198998 58 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm29778-201ENSMUST00000201667 466 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm44221-201ENSMUST00000203552 388 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm19116-201ENSMUST00000218592 642 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm36262-201ENSMUST00000223274 499 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.37□□□□□ -1.55
Nkx3-1P97436 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm13818-201ENSMUST00000119441 511 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm14294-201ENSMUST00000119749 751 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm23050-201ENSMUST00000158775 165 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm18199-201ENSMUST00000173820 835 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm26057-201ENSMUST00000178099 165 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Mir7008-201ENSMUST00000184398 63 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm28080-201ENSMUST00000188552 722 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm21524-201ENSMUST00000190499 696 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm21715-201ENSMUST00000191056 694 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm43945-201ENSMUST00000203595 754 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gm8863-201ENSMUST00000216630 926 ntBASIC5.36□□□□□ -1.55
Nkx3-1P97436 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx3-1P97436 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms