Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm24081-201ENSMUST00000175177 125 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm7780-201ENSMUST00000214787 406 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC4.04□□□□□ -1.76
PrkdcP97313 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
PrkdcP97313 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm28874-201ENSMUST00000190917 3134 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Mir6907-201ENSMUST00000183764 71 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Gm4714-201ENSMUST00000203395 279 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Gm17984-201ENSMUST00000205286 859 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Gm24706-201ENSMUST00000082806 137 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PrkdcP97313 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 AC156031.1-201ENSMUST00000217288 2555 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC4.03□□□□□ -1.76
PrkdcP97313 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm17907-201ENSMUST00000173150 710 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 V1rg10-201ENSMUST00000183378 937 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Mir7074-201ENSMUST00000183884 63 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm28683-201ENSMUST00000187134 615 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm28840-205ENSMUST00000189320 615 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm28835-203ENSMUST00000190062 615 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm29551-201ENSMUST00000190913 698 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm29781-201ENSMUST00000203862 478 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 AC130217.2-201ENSMUST00000224009 2990 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PrkdcP97313 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm6125-201ENSMUST00000217983 3472 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PrkdcP97313 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm42568-201ENSMUST00000195639 1841 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PrkdcP97313 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
PrkdcP97313 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm12874-201ENSMUST00000117190 913 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Mir6400-201ENSMUST00000184870 92 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm18194-202ENSMUST00000210952 3442 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 AC107453.1-201ENSMUST00000227490 3268 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PrkdcP97313 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm25826-201ENSMUST00000157090 137 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm22501-201ENSMUST00000158981 127 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms