Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Shmt1P50431 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm24142-201ENSMUST00000101960 107 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm24989-201ENSMUST00000104461 88 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm22103-201ENSMUST00000116733 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm26475-201ENSMUST00000116769 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm23620-201ENSMUST00000116812 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm25042-201ENSMUST00000116856 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm25540-201ENSMUST00000116880 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm13400-201ENSMUST00000117436 380 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm11972-201ENSMUST00000118514 389 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm8855-201ENSMUST00000118888 878 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm23550-201ENSMUST00000179003 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm25123-201ENSMUST00000179154 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm25353-201ENSMUST00000179366 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm22992-201ENSMUST00000179496 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm25892-201ENSMUST00000179867 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm24092-201ENSMUST00000180257 121 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm43382-201ENSMUST00000198954 838 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm4083-201ENSMUST00000207158 451 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm46191-201ENSMUST00000218899 433 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Shmt1P50431 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.78□□□□□ -1.32
Shmt1P50431 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Shmt1P50431 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.78□□□□□ -1.32
Shmt1P50431 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
Shmt1P50431 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Shmt1P50431 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Shmt1P50431 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Shmt1P50431 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm24709-201ENSMUST00000104123 132 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Shmt1P50431 Gm15016-201ENSMUST00000117300 720 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm11902-201ENSMUST00000118849 270 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm12565-201ENSMUST00000119004 649 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm14580-201ENSMUST00000119122 718 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm7058-201ENSMUST00000119209 902 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm11483-201ENSMUST00000119839 247 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm12438-201ENSMUST00000122034 336 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm4660-201ENSMUST00000131499 403 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 Gm12833-201ENSMUST00000136112 477 ntBASIC6.77□□□□□ -1.33
Shmt1P50431 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms