Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm24041-201ENSMUST00000083115 156 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.9□□□□□ -1.47
Cdx2P43241 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.9□□□□□ -1.47
Cdx2P43241 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Cdx2P43241 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.9□□□□□ -1.47
Cdx2P43241 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.9□□□□□ -1.47
Cdx2P43241 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Cdx2P43241 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.9□□□□□ -1.47
Cdx2P43241 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx2P43241 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.9□□□□□ -1.47
Cdx2P43241 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdx2P43241 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Cdx2P43241 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdx2P43241 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm24741-201ENSMUST00000158857 106 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Mirt2-201ENSMUST00000175179 285 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.89□□□□□ -1.47
Cdx2P43241 Mir6337-201ENSMUST00000184194 105 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Gm17934-201ENSMUST00000192818 422 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm44795-201ENSMUST00000205496 319 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm18996-201ENSMUST00000214851 755 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Gm36501-201ENSMUST00000221857 745 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdx2P43241 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
Cdx2P43241 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdx2P43241 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Thap6-201ENSMUST00000191860 3151 ntBASIC5.89□□□□□ -1.47
Cdx2P43241 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx2P43241 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx2P43241 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx2P43241 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdx2P43241 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdx2P43241 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Cdx2P43241 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm12482-201ENSMUST00000120435 630 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm14970-201ENSMUST00000122289 355 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm25152-201ENSMUST00000157117 114 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm24081-201ENSMUST00000175177 125 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm27158-201ENSMUST00000183813 238 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm27409-201ENSMUST00000184727 80 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm37758-201ENSMUST00000194275 629 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx2P43241 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdx2P43241 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.88□□□□□ -1.47
Cdx2P43241 Gm4032-201ENSMUST00000210886 487 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms