Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm5321-201ENSMUST00000072050 447 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp4P35123 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm23734-201ENSMUST00000083753 109 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp4P35123 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp4P35123 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Usp4P35123 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp4P35123 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.9□□□□□ -1.31
Usp4P35123 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp4P35123 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Usp4P35123 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.9□□□□□ -1.31
Usp4P35123 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.9□□□□□ -1.31
Usp4P35123 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp4P35123 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Usp4P35123 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Usp4P35123 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Usp4P35123 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp4P35123 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Gm13731-201ENSMUST00000117332 196 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm12587-201ENSMUST00000120180 427 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm14900-201ENSMUST00000120304 733 ntBASIC6.89□□□□□ -1.31
Usp4P35123 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm15780-201ENSMUST00000121283 935 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm14613-201ENSMUST00000122239 752 ntBASIC6.89□□□□□ -1.31
Usp4P35123 BC064078-201ENSMUST00000122939 570 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp4P35123 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm25557-201ENSMUST00000158084 315 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm16456-201ENSMUST00000174431 920 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm26381-201ENSMUST00000174895 92 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm8245-201ENSMUST00000182434 987 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm27970-201ENSMUST00000184854 407 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm37716-201ENSMUST00000193553 947 ntBASIC6.89□□□□□ -1.31
Usp4P35123 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm30517-201ENSMUST00000197350 772 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm45551-201ENSMUST00000211459 928 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm18591-201ENSMUST00000220568 763 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.89□□□□□ -1.31
Usp4P35123 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp4P35123 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp4P35123 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.89□□□□□ -1.31
Usp4P35123 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp4P35123 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.89□□□□□ -1.31
Usp4P35123 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp4P35123 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp4P35123 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms