Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm12439-201ENSMUST00000117162 365 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm13593-201ENSMUST00000121329 692 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm6977-201ENSMUST00000121568 512 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm15696-201ENSMUST00000121730 445 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm42708-201ENSMUST00000196332 905 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm7832-201ENSMUST00000202613 880 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm26442-201ENSMUST00000082588 153 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm10936-201ENSMUST00000105264 252 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm22714-201ENSMUST00000116894 78 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm14054-201ENSMUST00000120744 704 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm14531-201ENSMUST00000120845 285 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm14515-201ENSMUST00000121327 216 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm11962-201ENSMUST00000145746 255 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 BC049739-201ENSMUST00000202626 660 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxc5P32043 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxc5P32043 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm18940-201ENSMUST00000222518 871 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.57□□□□□ -1.52
Hoxc5P32043 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc5P32043 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc5P32043 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.56□□□□□ -1.52
Hoxc5P32043 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms