Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37774-201ENSMUST00000194401 245 ntBASIC7.17□□□□□ -1.26
Col1a1P11087 Gm2287-202ENSMUST00000199619 1000 ntBASIC7.17□□□□□ -1.26
Col1a1P11087 AC134537.2-201ENSMUST00000217770 575 ntBASIC7.17□□□□□ -1.26
Col1a1P11087 AC132384.3-201ENSMUST00000219709 472 ntBASIC7.17□□□□□ -1.26
Col1a1P11087 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
Col1a1P11087 AC154452.1-201ENSMUST00000225819 241 ntBASIC7.17□□□□□ -1.26
Col1a1P11087 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col1a1P11087 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col1a1P11087 Gm11516-201ENSMUST00000118450 1582 ntBASIC7.17□□□□□ -1.26
Col1a1P11087 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 AC107453.4-201ENSMUST00000227068 1817 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm13579-201ENSMUST00000118519 517 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Gm12293-201ENSMUST00000121898 590 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Gm22420-201ENSMUST00000178795 126 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm28017-201ENSMUST00000183434 126 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Gm27985-201ENSMUST00000185112 378 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC7.16□□□□□ -1.26
Col1a1P11087 Gm45777-201ENSMUST00000213009 301 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Col1a1P11087 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 AC122858.1-202ENSMUST00000228290 986 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Mir188-201ENSMUST00000083464 68 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 n-R5s46-201ENSMUST00000083960 116 ntBASIC7.16□□□□□ -1.26
Col1a1P11087 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Col1a1P11087 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col1a1P11087 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col1a1P11087 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col1a1P11087 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col1a1P11087 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col1a1P11087 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col1a1P11087 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
Col1a1P11087 Gm23485-201ENSMUST00000104181 155 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm24886-201ENSMUST00000104384 123 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col1a1P11087 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col1a1P11087 Gm27225-201ENSMUST00000183833 557 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm28973-201ENSMUST00000189310 613 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm29551-201ENSMUST00000190913 698 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm37024-201ENSMUST00000192224 868 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm42437-201ENSMUST00000197263 923 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm18325-201ENSMUST00000203228 835 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC7.15□□□□□ -1.27
Col1a1P11087 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col1a1P11087 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col1a1P11087 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.15□□□□□ -1.27
Col1a1P11087 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col1a1P11087 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Col1a1P11087 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm42436-201ENSMUST00000198804 3656 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.14□□□□□ -1.27
Col1a1P11087 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm14842-201ENSMUST00000119577 269 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col1a1P11087 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Col1a1P11087 Gm22235-201ENSMUST00000157085 110 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 Gm26086-201ENSMUST00000157902 263 ntBASIC7.14□□□□□ -1.27
Col1a1P11087 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms