Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Col4a1P02463 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm37482-201ENSMUST00000194899 2791 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm7680-201ENSMUST00000216198 1348 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm23954-201ENSMUST00000157213 353 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC7.35□□□□□ -1.23
Col4a1P02463 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.35□□□□□ -1.23
Col4a1P02463 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm31211-201ENSMUST00000199170 253 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.35□□□□□ -1.23
Col4a1P02463 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm3785-201ENSMUST00000221000 202 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm37132-201ENSMUST00000195553 2238 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Col4a1P02463 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col4a1P02463 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col4a1P02463 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Gm38096-201ENSMUST00000193692 2389 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
Col4a1P02463 Gm15877-201ENSMUST00000121897 964 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm12488-201ENSMUST00000122449 499 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm24692-201ENSMUST00000157761 146 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Gm3216-201ENSMUST00000166927 486 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm3141-201ENSMUST00000168726 499 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm8321-201ENSMUST00000181691 980 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
Col4a1P02463 Gm29755-201ENSMUST00000196976 948 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm36378-201ENSMUST00000201709 388 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col4a1P02463 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC7.34□□□□□ -1.23
Col4a1P02463 Gm7768-201ENSMUST00000222988 597 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Gm7887-201ENSMUST00000056948 537 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col4a1P02463 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.34□□□□□ -1.23
Col4a1P02463 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Col4a1P02463 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col4a1P02463 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col4a1P02463 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Col4a1P02463 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Col4a1P02463 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.34□□□□□ -1.24
Col4a1P02463 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col4a1P02463 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm6427-201ENSMUST00000118721 979 ntBASIC7.33□□□□□ -1.24
Col4a1P02463 Gm15660-201ENSMUST00000118997 478 ntBASIC7.33□□□□□ -1.24
Col4a1P02463 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC7.33□□□□□ -1.24
Col4a1P02463 Gm14175-201ENSMUST00000119835 241 ntBASIC7.33□□□□□ -1.24
Col4a1P02463 Gm26486-201ENSMUST00000158021 110 ntBASIC7.33□□□□□ -1.24
Col4a1P02463 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col4a1P02463 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms