Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm43771-201ENSMUST00000202931 1578 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm44660-201ENSMUST00000207134 2465 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm42510-201ENSMUST00000196470 2258 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm18879-201ENSMUST00000221187 1537 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm23834-201ENSMUST00000104436 129 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm14904-201ENSMUST00000117067 335 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm12842-201ENSMUST00000117298 476 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm8692-201ENSMUST00000118102 438 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm11920-201ENSMUST00000118491 563 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm4992-201ENSMUST00000120256 768 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Mir1903-201ENSMUST00000122574 80 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm25556-201ENSMUST00000158077 144 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm27853-201ENSMUST00000184176 250 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm28023-201ENSMUST00000184556 60 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm27825-201ENSMUST00000184586 60 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm6197-201ENSMUST00000192273 454 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm37285-201ENSMUST00000194465 1139 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm37901-201ENSMUST00000195107 514 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm2287-201ENSMUST00000197417 1084 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm44112-201ENSMUST00000204787 372 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm9367-201ENSMUST00000205703 546 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm7972-201ENSMUST00000208434 1137 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm31663-202ENSMUST00000208481 1190 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 AC135353.1-201ENSMUST00000215330 630 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 AC133598.2-201ENSMUST00000224302 624 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Arhgef33-207ENSMUST00000224966 490 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 CT030645.3-201ENSMUST00000225483 1022 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Mir425-201ENSMUST00000083645 85 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Mir455-201ENSMUST00000093594 82 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm37255-201ENSMUST00000193302 3060 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm37864-201ENSMUST00000195308 3075 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm4927-201ENSMUST00000219548 1318 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm38118-201ENSMUST00000192052 2222 ntBASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb3O54879 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb3O54879 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm44242-201ENSMUST00000204212 2721 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm25083-201ENSMUST00000102319 92 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms