Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm8412-201ENSMUST00000077493 440 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm25433-201ENSMUST00000158283 286 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm8185-201ENSMUST00000160999 669 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm3605-201ENSMUST00000185858 440 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm38291-201ENSMUST00000193671 259 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scn3aA2ASI5 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm14515-201ENSMUST00000121327 216 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm44795-201ENSMUST00000205496 319 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scn3aA2ASI5 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm14679-201ENSMUST00000121536 722 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm25152-201ENSMUST00000157117 114 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Mir8097-201ENSMUST00000185150 119 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm29124-201ENSMUST00000186576 452 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm23330-201ENSMUST00000082660 164 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms