Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm4613-201ENSMUST00000165488 276 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm37193-201ENSMUST00000193087 513 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm7946-201ENSMUST00000203326 958 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm18040-201ENSMUST00000217922 827 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm9118-201ENSMUST00000219246 754 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm7045-201ENSMUST00000221466 605 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 AC154734.1-201ENSMUST00000219957 2141 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm43369-201ENSMUST00000196373 1552 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Snord88a-201ENSMUST00000116723 90 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm14070-201ENSMUST00000120773 428 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm24517-201ENSMUST00000122560 107 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Snora81-201ENSMUST00000157310 178 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm24286-201ENSMUST00000157632 128 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm22262-201ENSMUST00000158713 86 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm10177-201ENSMUST00000160052 444 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm7426-201ENSMUST00000179046 404 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm28956-201ENSMUST00000189047 427 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm18775-201ENSMUST00000190763 586 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm28927-201ENSMUST00000191528 272 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Gm3678-201ENSMUST00000218888 492 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clp1Q99LI9 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Clp1Q99LI9 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.56□□□□□ -1.2
Clp1Q99LI9 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms