Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdhga4Q91XY4 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdhga4Q91XY4 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.56□□□□□ -1.36
Pcdhga4Q91XY4 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
Pcdhga4Q91XY4 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm2178-201ENSMUST00000104927 357 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm15311-201ENSMUST00000119682 282 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm15305-201ENSMUST00000120354 288 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm5166-201ENSMUST00000121332 573 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm5843-201ENSMUST00000121631 476 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm12885-201ENSMUST00000122246 328 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm7613-201ENSMUST00000139070 487 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm2966-201ENSMUST00000166052 481 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm17204-201ENSMUST00000167936 478 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm6726-201ENSMUST00000172786 681 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm29474-201ENSMUST00000187688 379 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm28396-201ENSMUST00000190309 379 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm37996-201ENSMUST00000191859 367 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm37908-201ENSMUST00000195828 470 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm43141-201ENSMUST00000199695 274 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm18012-201ENSMUST00000204558 773 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm46436-201ENSMUST00000221851 1294 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm22053-201ENSMUST00000083394 200 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdhga4Q91XY4 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm22231-201ENSMUST00000101027 73 ntBASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm14388-201ENSMUST00000118119 477 ntBASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm12573-201ENSMUST00000118158 286 ntBASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm12135-201ENSMUST00000119170 466 ntBASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.54□□□□□ -1.36
Pcdhga4Q91XY4 Gm13237-201ENSMUST00000122151 635 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms