Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm8501-201ENSMUST00000117684 432 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm12813-201ENSMUST00000119615 902 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm12322-201ENSMUST00000121605 389 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm11434-201ENSMUST00000122379 629 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm16269-201ENSMUST00000160532 409 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm20480-201ENSMUST00000173953 250 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm20453-201ENSMUST00000173968 226 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Mir5107-201ENSMUST00000175586 88 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm26607-201ENSMUST00000180661 867 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm27186-201ENSMUST00000184223 307 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm37581-201ENSMUST00000192371 988 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm37966-201ENSMUST00000193122 326 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 AC165349.1-201ENSMUST00000217896 424 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 CT485612.1-201ENSMUST00000222555 382 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 AC107663.1-201ENSMUST00000224257 468 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 AC133598.4-201ENSMUST00000224577 454 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 AC156016.5-201ENSMUST00000228742 355 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gpr87-201ENSMUST00000056898 1080 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm10205-201ENSMUST00000087431 234 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm37953-201ENSMUST00000195293 1884 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Nup35Q8R4R6 Gm44102-201ENSMUST00000204031 1666 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm43523-201ENSMUST00000197397 2878 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm14294-201ENSMUST00000119749 751 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm25281-201ENSMUST00000157270 104 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Snora47-201ENSMUST00000157483 138 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm25374-201ENSMUST00000158158 101 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm17511-201ENSMUST00000172206 342 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm8609-201ENSMUST00000182967 998 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm4860-201ENSMUST00000200368 454 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm9419-201ENSMUST00000200672 567 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm6681-201ENSMUST00000205215 607 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm18805-201ENSMUST00000206872 655 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 AC154738.7-201ENSMUST00000228606 579 ntBASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Nup35Q8R4R6 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms