Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm5055-201ENSMUST00000215697 581 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 CU024892.1-201ENSMUST00000224869 515 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm38096-201ENSMUST00000193692 2389 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm25415-201ENSMUST00000104220 132 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Snora35-201ENSMUST00000104579 128 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm12073-201ENSMUST00000117382 524 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm14913-201ENSMUST00000120011 1093 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm13338-201ENSMUST00000120235 361 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm23553-201ENSMUST00000157817 295 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm27348-201ENSMUST00000184511 170 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm21089-201ENSMUST00000215843 325 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.48□□□□□ -1.21
Brf1Q8CFK2 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm22714-201ENSMUST00000116894 78 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm11462-201ENSMUST00000117749 562 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm23954-201ENSMUST00000157213 353 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm22223-201ENSMUST00000157360 125 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm25219-201ENSMUST00000157545 330 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm4207-201ENSMUST00000173144 960 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Mir7685-201ENSMUST00000183555 62 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms