Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm15530-201ENSMUST00000122206 555 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm26346-201ENSMUST00000157525 329 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm22094-201ENSMUST00000158976 117 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm5334-201ENSMUST00000187472 720 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm8454-201ENSMUST00000196980 811 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm42919-201ENSMUST00000197753 1284 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm18330-201ENSMUST00000199246 547 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm46364-201ENSMUST00000218548 319 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm25782-201ENSMUST00000122526 289 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm18447-201ENSMUST00000187501 307 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm29161-201ENSMUST00000188250 699 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm38097-201ENSMUST00000192936 439 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm37380-201ENSMUST00000193752 397 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm9788-201ENSMUST00000057038 906 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms