Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 AC151984.1-201ENSMUST00000218261 2976 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Lipe-203ENSMUST00000105177 1251 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm13604-201ENSMUST00000119332 482 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm12303-201ENSMUST00000119506 673 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm12808-201ENSMUST00000120597 404 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm23071-201ENSMUST00000158242 115 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm24081-201ENSMUST00000175177 125 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm8826-201ENSMUST00000193161 948 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm4587-201ENSMUST00000209135 637 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm44417-201ENSMUST00000203298 3359 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm42636-201ENSMUST00000197174 2239 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm15560-201ENSMUST00000117107 643 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm22312-201ENSMUST00000158005 130 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm37196-201ENSMUST00000194762 906 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm14550-201ENSMUST00000117918 407 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm27039-201ENSMUST00000182438 962 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms