Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Mir465c-2-201ENSMUST00000104757 81 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm12710-201ENSMUST00000119011 216 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm14788-201ENSMUST00000119457 375 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm7309-201ENSMUST00000121670 581 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm22342-201ENSMUST00000122647 298 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm3160-201ENSMUST00000128343 607 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm2709-201ENSMUST00000142979 350 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm23077-201ENSMUST00000157854 116 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm3208-201ENSMUST00000168281 427 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Olfr331-202ENSMUST00000170501 957 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm8183-201ENSMUST00000183134 980 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm43147-201ENSMUST00000196944 542 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm43243-201ENSMUST00000199964 278 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm43224-201ENSMUST00000201567 898 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm45343-201ENSMUST00000210452 828 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim47Q8C0E3 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.1□□□□□ -1.11
Trim47Q8C0E3 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm13865-201ENSMUST00000120957 865 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm16412-201ENSMUST00000121602 273 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm10177-202ENSMUST00000161698 207 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm17194-201ENSMUST00000164610 348 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm18848-201ENSMUST00000182069 792 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm9892-201ENSMUST00000182415 992 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm27684-201ENSMUST00000183778 80 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm28343-201ENSMUST00000185386 112 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm29234-201ENSMUST00000187452 1262 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm28956-201ENSMUST00000189047 427 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm29525-201ENSMUST00000189844 699 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm29523-201ENSMUST00000191415 699 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm44722-201ENSMUST00000206473 436 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm45100-201ENSMUST00000209153 391 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms