Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm8501-201ENSMUST00000117684 432 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm11462-201ENSMUST00000117749 562 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm7927-201ENSMUST00000118818 880 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm5125-201ENSMUST00000148614 624 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Snora47-201ENSMUST00000157483 138 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm20480-201ENSMUST00000173953 250 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm8009-201ENSMUST00000191672 436 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm18407-201ENSMUST00000192126 790 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm5050-201ENSMUST00000197164 775 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm11609-201ENSMUST00000121926 793 ntBASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm27004-201ENSMUST00000183300 727 ntBASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trub1Q8C0D0 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Gm15332-201ENSMUST00000118386 357 ntBASIC6.22□□□□□ -1.41
Trub1Q8C0D0 Gm11990-201ENSMUST00000121505 897 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms