Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm15073-201ENSMUST00000117432 634 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm13428-201ENSMUST00000117540 365 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm14676-201ENSMUST00000117722 858 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm12421-201ENSMUST00000119071 307 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm13864-201ENSMUST00000119745 785 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm13991-201ENSMUST00000120190 648 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm16212-201ENSMUST00000136190 282 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm24858-201ENSMUST00000158058 323 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm22763-201ENSMUST00000158374 107 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm8254-201ENSMUST00000182326 972 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm28974-201ENSMUST00000187893 231 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm18403-201ENSMUST00000192907 529 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm44403-201ENSMUST00000198554 129 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm43442-201ENSMUST00000202865 414 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm38941-201ENSMUST00000208606 529 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 AC163743.1-201ENSMUST00000224309 270 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 AC154592.1-201ENSMUST00000225784 574 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 AC102000.1-201ENSMUST00000226247 727 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Agtr1b-201ENSMUST00000068316 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm23041-201ENSMUST00000083868 106 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Olfr467-201ENSMUST00000084756 927 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Hnrnpk-201ENSMUST00000043269 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Nbr1-205ENSMUST00000107212 4168 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm44005-201ENSMUST00000203186 3173 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 AC166159.1-201ENSMUST00000227154 1380 ntBASIC9.09□□□□□ -0.95
Trim35Q8C006 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Zfp551-202ENSMUST00000120220 2195 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Zfand1-201ENSMUST00000037839 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 4930433I11Rik-201ENSMUST00000171664 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Trim35Q8C006 Mageb16-201ENSMUST00000052283 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Cd99l2-203ENSMUST00000114586 3459 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm42648-201ENSMUST00000200774 2505 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm10741-201ENSMUST00000218151 1748 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm15455-201ENSMUST00000117459 2557 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Platr1-201ENSMUST00000188474 3316 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm12425-201ENSMUST00000119580 363 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm12115-201ENSMUST00000119969 447 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm13675-201ENSMUST00000120616 529 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm13377-201ENSMUST00000137984 683 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm5699-201ENSMUST00000152491 723 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm23169-201ENSMUST00000157157 112 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm25185-201ENSMUST00000157754 96 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm5093-201ENSMUST00000166852 522 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm22347-201ENSMUST00000180276 132 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm32340-201ENSMUST00000192883 259 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm44341-201ENSMUST00000196168 138 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 AC125099.1-201ENSMUST00000197780 138 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 AC125099.2-201ENSMUST00000198228 138 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm9523-201ENSMUST00000199146 1159 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Gm6885-201ENSMUST00000217261 372 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim35Q8C006 AC157570.3-201ENSMUST00000219281 205 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 AC192333.3-201ENSMUST00000224041 463 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Ermard-210ENSMUST00000226599 788 ntBASIC9.08□□□□□ -0.96
Trim35Q8C006 Taar6-201ENSMUST00000057080 1038 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trim35Q8C006 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms