Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm4073-201ENSMUST00000176792 3500 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm43864-201ENSMUST00000204452 4028 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm13870-201ENSMUST00000117214 1023 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm12099-201ENSMUST00000118660 750 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm11976-201ENSMUST00000119236 295 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm15959-201ENSMUST00000121724 368 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm23995-201ENSMUST00000158060 129 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm18199-201ENSMUST00000173820 835 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm18191-201ENSMUST00000174624 824 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm26455-201ENSMUST00000175300 92 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm37477-201ENSMUST00000195215 884 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm43382-201ENSMUST00000198954 838 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm43105-201ENSMUST00000202987 459 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 AC133650.1-201ENSMUST00000217243 578 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm3800-201ENSMUST00000221086 554 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm10095-201ENSMUST00000222765 483 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm36262-201ENSMUST00000223274 499 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 AC113198.1-201ENSMUST00000226353 832 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp40Q8BWR4 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm38156-201ENSMUST00000194601 2260 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm4911-201ENSMUST00000119388 945 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm11852-201ENSMUST00000120806 222 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm24719-201ENSMUST00000157520 110 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms