Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Pcdh19Q80TF3 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Pcdh19Q80TF3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm24869-201ENSMUST00000104072 128 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm25344-201ENSMUST00000104503 132 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm14869-201ENSMUST00000119007 884 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm12710-201ENSMUST00000119011 216 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm11798-201ENSMUST00000119150 421 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm13900-201ENSMUST00000119402 498 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm13444-201ENSMUST00000119445 522 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm7571-201ENSMUST00000120252 927 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm12535-201ENSMUST00000121025 484 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm11257-201ENSMUST00000121313 315 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm6472-201ENSMUST00000178147 651 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm8609-201ENSMUST00000182967 998 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm27236-201ENSMUST00000184147 442 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Mrgpra14-201ENSMUST00000189782 913 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm38149-201ENSMUST00000191943 339 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm45725-201ENSMUST00000212962 337 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm18252-203ENSMUST00000215855 757 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 AC153852.1-201ENSMUST00000217881 567 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.08□□□□□ -1.28
Pcdh19Q80TF3 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms