Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm21909-201ENSMUST00000178260 439 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm29335-201ENSMUST00000188361 459 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm44896-201ENSMUST00000206190 772 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm4083-201ENSMUST00000207158 451 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 AC116460.1-201ENSMUST00000219040 313 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 AC121137.1-201ENSMUST00000225272 602 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Olfr1143-201ENSMUST00000090708 945 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 AC169985.1-201ENSMUST00000223648 2439 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm44769-201ENSMUST00000206120 2809 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm12608-201ENSMUST00000122013 1715 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 AC130219.1-201ENSMUST00000228406 3433 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm22426-201ENSMUST00000103811 96 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm15422-201ENSMUST00000117453 541 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm5752-201ENSMUST00000117771 594 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm13772-201ENSMUST00000118431 317 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm12879-201ENSMUST00000120003 1182 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm3160-201ENSMUST00000128343 607 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Mir1930-201ENSMUST00000158799 84 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm6428-201ENSMUST00000161062 345 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm27599-201ENSMUST00000183758 174 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Gm20302-201ENSMUST00000080671 275 ntBASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim41Q5NCC3 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim41Q5NCC3 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim41Q5NCC3 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim41Q5NCC3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim41Q5NCC3 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim41Q5NCC3 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm11905-201ENSMUST00000117653 678 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm12099-201ENSMUST00000118660 750 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm14307-201ENSMUST00000118930 291 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm12262-201ENSMUST00000119915 305 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm15390-201ENSMUST00000120323 738 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm14297-201ENSMUST00000129110 291 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm25505-201ENSMUST00000157220 246 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm5871-201ENSMUST00000176461 718 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm4076-201ENSMUST00000179230 965 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Mir6241-201ENSMUST00000184225 103 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm27210-201ENSMUST00000184263 402 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm29412-201ENSMUST00000185869 696 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm29634-201ENSMUST00000188467 696 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm28956-201ENSMUST00000189047 427 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm28699-201ENSMUST00000189193 696 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm28837-201ENSMUST00000190397 696 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm28070-201ENSMUST00000191502 445 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm7039-201ENSMUST00000205138 346 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm5917-201ENSMUST00000217638 721 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 AC126685.1-201ENSMUST00000221001 121 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms