Protein–RNA interactions for Protein: Q04890

Sox12, Transcription factor SOX-12, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox12Q04890 1700049E22Rik-201ENSMUST00000187986 507 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 Npn2-202ENSMUST00000189275 235 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 Gm29479-201ENSMUST00000190352 455 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 Gm4785-201ENSMUST00000191025 751 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sox12Q04890 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 Gm18484-201ENSMUST00000204389 991 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox12Q04890 AC167229.1-201ENSMUST00000220057 469 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 AC147044.1-201ENSMUST00000223850 552 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 AC133598.3-204ENSMUST00000224260 767 ntBASIC11.29□□□□□ -0.6
Sox12Q04890 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sox12Q04890 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox12Q04890 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Acox3-202ENSMUST00000068947 3976 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox12Q04890 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox12Q04890 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Sox12Q04890 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gramd1b-203ENSMUST00000119373 3857 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm5997-201ENSMUST00000208154 1864 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm37483-201ENSMUST00000194382 1484 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox12Q04890 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm14967-201ENSMUST00000153483 335 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox12Q04890 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm26349-201ENSMUST00000157530 130 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm24838-201ENSMUST00000158684 130 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox12Q04890 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm9672-201ENSMUST00000166437 425 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm18779-201ENSMUST00000173444 577 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox12Q04890 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Ckb-ps1-201ENSMUST00000199192 1127 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm42605-201ENSMUST00000199565 385 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm43709-201ENSMUST00000199870 559 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm44267-201ENSMUST00000204132 385 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm44580-201ENSMUST00000206333 877 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Gm46997-201ENSMUST00000222108 217 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 CT025157.1-201ENSMUST00000226241 292 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 CT009556.1-201ENSMUST00000227282 449 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm5619-201ENSMUST00000071172 760 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox12Q04890 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox12Q04890 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox12Q04890 Gm18879-201ENSMUST00000221187 1537 ntBASIC11.28□□□□□ -0.6
Sox12Q04890 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sox12Q04890 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox12Q04890 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox12Q04890 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sox12Q04890 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sox12Q04890 Gm43311-201ENSMUST00000200016 2377 ntBASIC11.27□□□□□ -0.6
Sox12Q04890 Stambp-201ENSMUST00000068054 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox12Q04890 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sox12Q04890 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox12Q04890 Gm28447-202ENSMUST00000186677 2230 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox12Q04890 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox12Q04890 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC11.27□□□□□ -0.61
Sox12Q04890 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox12Q04890 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Sox12Q04890 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox12Q04890 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC11.27□□□□□ -0.61
Sox12Q04890 Gm15994-201ENSMUST00000118029 402 ntBASIC11.27□□□□□ -0.61
Sox12Q04890 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC11.27□□□□□ -0.61
Sox12Q04890 Clec2f-201ENSMUST00000121051 374 ntBASIC11.27□□□□□ -0.61
Sox12Q04890 Gm11965-201ENSMUST00000122017 277 ntBASIC11.27□□□□□ -0.61
Sox12Q04890 Gm24748-201ENSMUST00000157836 108 ntBASIC11.27□□□□□ -0.61
Sox12Q04890 Gm3030-201ENSMUST00000163410 516 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms