Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Scn1bP97952 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm11970-201ENSMUST00000116105 320 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm12713-201ENSMUST00000118404 764 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Zfp389-201ENSMUST00000118425 675 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm15149-201ENSMUST00000119370 360 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm11866-201ENSMUST00000120209 335 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm16284-201ENSMUST00000140995 400 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm22728-201ENSMUST00000158087 129 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm21999-201ENSMUST00000165985 387 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm9672-201ENSMUST00000166437 425 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm9529-201ENSMUST00000177598 579 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm27178-201ENSMUST00000184962 340 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm29385-201ENSMUST00000186831 363 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm36638-201ENSMUST00000193295 400 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm36965-201ENSMUST00000193797 394 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm4525-201ENSMUST00000198831 254 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.66□□□□□ -1.5
Scn1bP97952 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm43922-201ENSMUST00000205071 328 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm9357-201ENSMUST00000207138 805 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 AC155709.1-201ENSMUST00000218794 162 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Gm7252-201ENSMUST00000223284 456 ntBASIC5.66□□□□□ -1.5
Scn1bP97952 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Scn1bP97952 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn1bP97952 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn1bP97952 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.66□□□□□ -1.5
Scn1bP97952 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn1bP97952 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.66□□□□□ -1.5
Scn1bP97952 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Scn1bP97952 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm18908-201ENSMUST00000207125 1483 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm23748-201ENSMUST00000104227 131 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm15310-201ENSMUST00000117891 372 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Gm14070-201ENSMUST00000120773 428 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm23077-201ENSMUST00000157854 116 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Gm16138-201ENSMUST00000159341 821 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.65□□□□□ -1.5
Scn1bP97952 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.65□□□□□ -1.5
Scn1bP97952 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm27014-201ENSMUST00000182658 937 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm29489-201ENSMUST00000188934 324 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Gm29592-201ENSMUST00000189434 370 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm43664-201ENSMUST00000196038 734 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC5.65□□□□□ -1.5
Scn1bP97952 Gm18838-201ENSMUST00000204855 886 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Gm19885-201ENSMUST00000212853 343 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Scn1bP97952 AC124184.1-201ENSMUST00000218167 283 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.65□□□□□ -1.5
Scn1bP97952 Gm9237-201ENSMUST00000221499 548 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms