Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.67□□□□□ -1.34
NcanP55066 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.67□□□□□ -1.34
NcanP55066 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
NcanP55066 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.67□□□□□ -1.34
NcanP55066 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 Gm25758-201ENSMUST00000103987 129 ntBASIC6.67□□□□□ -1.34
NcanP55066 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.67□□□□□ -1.34
NcanP55066 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Gm6744-201ENSMUST00000119303 543 ntBASIC6.67□□□□□ -1.34
NcanP55066 Gm13207-201ENSMUST00000119862 773 ntBASIC6.67□□□□□ -1.34
NcanP55066 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.67□□□□□ -1.34
NcanP55066 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.67□□□□□ -1.34
NcanP55066 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.67□□□□□ -1.34
NcanP55066 Gm26318-201ENSMUST00000176507 96 ntBASIC6.67□□□□□ -1.34
NcanP55066 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.67□□□□□ -1.34
NcanP55066 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 Gm27970-201ENSMUST00000184854 407 ntBASIC6.67□□□□□ -1.34
NcanP55066 Gm18752-201ENSMUST00000192876 608 ntBASIC6.67□□□□□ -1.34
NcanP55066 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.67□□□□□ -1.34
NcanP55066 Gm18442-201ENSMUST00000220925 639 ntBASIC6.67□□□□□ -1.34
NcanP55066 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.67□□□□□ -1.34
NcanP55066 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.67□□□□□ -1.34
NcanP55066 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.67□□□□□ -1.34
NcanP55066 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.67□□□□□ -1.34
NcanP55066 Gm6863-201ENSMUST00000052882 636 ntBASIC6.67□□□□□ -1.34
NcanP55066 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NcanP55066 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NcanP55066 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NcanP55066 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NcanP55066 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NcanP55066 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NcanP55066 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.66□□□□□ -1.34
NcanP55066 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Gm25439-201ENSMUST00000158280 131 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gm25489-201ENSMUST00000158727 141 ntBASIC6.66□□□□□ -1.34
NcanP55066 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gm22367-201ENSMUST00000178930 132 ntBASIC6.66□□□□□ -1.34
NcanP55066 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gm37444-201ENSMUST00000193605 439 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
NcanP55066 Gm43743-202ENSMUST00000198353 491 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.66□□□□□ -1.34
NcanP55066 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 Gm8863-201ENSMUST00000216630 926 ntBASIC6.66□□□□□ -1.34
NcanP55066 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.66□□□□□ -1.34
NcanP55066 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.66□□□□□ -1.34
NcanP55066 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.66□□□□□ -1.34
NcanP55066 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.66□□□□□ -1.34
NcanP55066 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.66□□□□□ -1.34
NcanP55066 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.66□□□□□ -1.34
NcanP55066 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
NcanP55066 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.66□□□□□ -1.34
NcanP55066 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.66□□□□□ -1.34
NcanP55066 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.66□□□□□ -1.34
NcanP55066 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NcanP55066 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.66□□□□□ -1.34
NcanP55066 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
NcanP55066 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.65□□□□□ -1.34
NcanP55066 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms