Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sox3P53784 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Sox3P53784 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.97□□□□□ -1.45
Sox3P53784 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Mir92b-201ENSMUST00000102300 83 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm26079-201ENSMUST00000104066 133 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm5387-201ENSMUST00000119776 857 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm12768-201ENSMUST00000120055 759 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.97□□□□□ -1.45
Sox3P53784 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Mir3110-201ENSMUST00000175053 80 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm21241-201ENSMUST00000179551 934 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sox3P53784 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm28467-201ENSMUST00000190981 318 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm20819-201ENSMUST00000191091 925 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm20871-201ENSMUST00000191322 931 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm37196-201ENSMUST00000194762 906 ntBASIC5.97□□□□□ -1.45
Sox3P53784 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm43354-201ENSMUST00000196862 346 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm17824-201ENSMUST00000197690 805 ntBASIC5.97□□□□□ -1.45
Sox3P53784 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.97□□□□□ -1.45
Sox3P53784 Gm17950-201ENSMUST00000214617 646 ntBASIC5.97□□□□□ -1.45
Sox3P53784 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm18592-201ENSMUST00000221529 276 ntBASIC5.97□□□□□ -1.45
Sox3P53784 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.97□□□□□ -1.45
Sox3P53784 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.97□□□□□ -1.45
Sox3P53784 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm23238-201ENSMUST00000083007 164 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Gm25515-201ENSMUST00000083858 157 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.97□□□□□ -1.45
Sox3P53784 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox3P53784 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox3P53784 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.97□□□□□ -1.45
Sox3P53784 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sox3P53784 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sox3P53784 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sox3P53784 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sox3P53784 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sox3P53784 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sox3P53784 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.96□□□□□ -1.45
Sox3P53784 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Sox3P53784 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms