Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm8250-201ENSMUST00000117398 774 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm15073-201ENSMUST00000117432 634 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm13400-201ENSMUST00000117436 380 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm15659-201ENSMUST00000118881 341 ntBASIC7.25□□□□□ -1.25
Sox1P53783 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm13815-201ENSMUST00000119963 412 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm25906-201ENSMUST00000158489 126 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm17366-201ENSMUST00000167629 187 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm18417-201ENSMUST00000176564 648 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Sox1P53783 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm20954-201ENSMUST00000189078 644 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm3351-201ENSMUST00000193454 505 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm38334-201ENSMUST00000195060 313 ntBASIC7.25□□□□□ -1.25
Sox1P53783 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm43089-201ENSMUST00000199162 275 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm43141-201ENSMUST00000199695 274 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm31166-201ENSMUST00000209326 288 ntBASIC7.25□□□□□ -1.25
Sox1P53783 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC7.25□□□□□ -1.25
Sox1P53783 AC116726.2-201ENSMUST00000217629 986 ntBASIC7.25□□□□□ -1.25
Sox1P53783 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.25□□□□□ -1.25
Sox1P53783 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm5436-201ENSMUST00000058103 643 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm21731-201ENSMUST00000079524 489 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Mir16-2-201ENSMUST00000083672 95 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.25□□□□□ -1.25
Sox1P53783 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.25□□□□□ -1.25
Sox1P53783 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 AC159308.1-201ENSMUST00000216615 1351 ntBASIC7.24□□□□□ -1.25
Sox1P53783 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sox1P53783 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Sox1P53783 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sox1P53783 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.24□□□□□ -1.25
Sox1P53783 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gm12901-201ENSMUST00000118690 532 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm13462-201ENSMUST00000121472 961 ntBASIC7.24□□□□□ -1.25
Sox1P53783 BC064078-201ENSMUST00000122939 570 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.24□□□□□ -1.25
Sox1P53783 Gm24176-201ENSMUST00000158928 121 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Adgrg4-206ENSMUST00000168724 531 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.24□□□□□ -1.25
Sox1P53783 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.24□□□□□ -1.25
Sox1P53783 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm23810-201ENSMUST00000175150 74 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm23187-201ENSMUST00000175746 86 ntBASIC7.24□□□□□ -1.25
Sox1P53783 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gm29641-201ENSMUST00000188955 259 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Mrgpra14-201ENSMUST00000189782 913 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm38149-201ENSMUST00000191943 339 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm17965-201ENSMUST00000193904 517 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC7.24□□□□□ -1.25
Sox1P53783 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gm36378-201ENSMUST00000201709 388 ntBASIC7.24□□□□□ -1.25
Sox1P53783 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.24□□□□□ -1.25
Sox1P53783 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms